edu.stanford.math.plex4.homology.barcodes

Class BarcodeCollection<T extends java.lang.Comparable<T>>

java.lang.Object

edu.stanford.math.plex4.homology.barcodes.PersistenceInvariantDescriptor<Interval<T>,G>

edu.stanford.math.plex4.homology.barcodes.AnnotatedBarcodeCollection<T,java.lang.Object>

edu.stanford.math.plex4.homology.barcodes.BarcodeCollection<T>

All Implemented Interfaces:

java.lang.Iterable<java.util.Map.Entry<java.lang.Integer,java.util.List<edu.stanford.math.primitivelib.autogen.pair.ObjectObjectPair<Interval<T>,java.lang.Object>>>>

public class BarcodeCollection<T extends java.lang.Comparable<T>>
extends AnnotatedBarcodeCollection<T,java.lang.Object>

Field Summary

Fields inherited from class edu.stanford.math.plex4.homology.barcodes.AnnotatedBarcodeCollection

useLeftClosedDefault, useRightClosedDefault

Fields inherited from class edu.stanford.math.plex4.homology.barcodes.PersistenceInvariantDescriptor

generators, intervalGeneratorPairs, intervals

Constructor Summary

Constructors

Constructor and Description
BarcodeCollection()

Method Summary

Methods

Modifier and Type	Method and Description
void	addInterval(int dimension, Interval<T> interval)
void	addInterval(int dimension, T start, T end) This function adds the specified finite interval (start, end} at the supplied dimension.
void	addLeftInfiniteInterval(int dimension, T end) This function adds the specified semi-infinite interval {-infinity, end} at the supplied dimension.
void	addRightInfiniteInterval(int dimension, T start) This function adds the specified semi-infinite interval {start, infinity} at the supplied dimension.
static <T extends java.lang.Comparable<T>,G> BarcodeCollection<T>	forgetGeneratorType(AnnotatedBarcodeCollection<T,G> annotatedBarcodeCollection)

Methods inherited from class edu.stanford.math.plex4.homology.barcodes.AnnotatedBarcodeCollection

addInterval, addLeftInfiniteInterval, addRightInfiniteInterval, filterByMaxDimension, filterEvenIntervals, filterPositiveMeasureIntervals, getBettiNumbersMap, getInfiniteIntervals, setLeftClosedDefault, setRightClosedDefault

Methods inherited from class edu.stanford.math.plex4.homology.barcodes.PersistenceInvariantDescriptor

addInterval, equals, getBettiNumbers, getBettiSequence, getDimensions, getGeneratorIterator, getGeneratorsAtDimension, getIntervalGeneratorPairIterator, getIntervalGeneratorPairsAtDimension, getIntervalIterator, getIntervalsAtDimension, hashCode, iterator, toString, union

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

BarcodeCollection

public BarcodeCollection()

Method Detail

addInterval

public void addInterval(int dimension,
               T start,
               T end)

This function adds the specified finite interval (start, end} at the supplied dimension. The curly braces are meant to indicate that the closedness of the end points depends on the default state of the class.

Parameters:

dimension - the dimension to add to

start - the starting point of the interval

end - the ending point of the interval

addRightInfiniteInterval

public void addRightInfiniteInterval(int dimension,
                            T start)

This function adds the specified semi-infinite interval {start, infinity} at the supplied dimension. The curly braces are meant to indicate that the closedness of the end points depends on the default state of the class.

Parameters:

dimension - the dimension to add to

start - the starting point of the interval

addLeftInfiniteInterval

public void addLeftInfiniteInterval(int dimension,
                           T end)

This function adds the specified semi-infinite interval {-infinity, end} at the supplied dimension. The curly braces are meant to indicate that the closedness of the end points depends on the default state of the class.

Parameters:

dimension - the dimension to add to

end - the ending point of the interval

addInterval

public void addInterval(int dimension,
               Interval<T> interval)

forgetGeneratorType

public static <T extends java.lang.Comparable<T>,G> BarcodeCollection<T> forgetGeneratorType(AnnotatedBarcodeCollection<T,G> annotatedBarcodeCollection)